BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013A12SP1|AL426461
(857 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig602 1664 0.0
>3x_Contig602
Length = 2648
Score = 1664 bits (839), Expect = 0.0
Identities = 852/857 (99%)
Strand = Plus / Minus
Query: 1 gatcaatgacacattatggagtcttgtaatggtatgctgggaaatggataatgtcatcgt 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1065 gatcaatgacacattctggagtcttgtaatggtatgctgggaaatggataatgtcatcgt 1006
Query: 61 ttgatggatttttattgcaaattaaggccaatgacccttttttaccacatctgaggacac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1005 ttgatggatttttattgcaaattaaggccaatgacccttttttaccacatctgaggacac 946
Query: 121 aaaaawaaccaggtttaatcaatgctgctaatttcaataatattgtgctgcaatccgaaa 180
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 945 aaatgttaccaggtttaatcaatgctgctaatttcaataatattgtgctgcaatccgaaa 886
Query: 181 gttcagttggctctgtttcacccagcatcctagcgccttcttccgcatttggcgaaaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 885 gttcagttggctctgtttcacccagcatcctagcgccttcttccgcatttggcgaaaaga 826
Query: 241 tgaaatggtatggtccgttgagcaacttcttaatcccttcgaggtgctcaacgttacaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 tgaaatggtatggtccgttgagcaacttcttaatcccttcgaggtgctcaacgttacaca 766
Query: 301 aatctggtattggttcccatataaacgtttgacctgttttcagagttccctcaaatgaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 aatctggtattggttcccatataaacgtttgacctgttttcagagttccctcaaatgaca 706
Query: 361 actcttcggcaagcttatccagaatatcggccactctatcagcagaacatagcaaatgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 actcttcggcaagcttatccagaatatcggccactctatcagcagaacatagcaaatgat 646
Query: 421 agcatgaaactctttgtactgctttgacaccgaacgactcgcaccagtcagaaacatcta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 agcatgaaactctttgtactgctttgacaccgaacgactcgcaccagtcagaaacatcta 586
Query: 481 ttcttttctttggcgctagatatttgaatgatctaaaatcattcggaccatatacgttat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 ttcttttctttggcgctagatatttgaatgatctaaaatcattcggaccatatacgttat 526
Query: 541 aacctcttgtagttaatctttcattgtcatctcgaaacacacaacccgtgtcccaagatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 aacctcttgtagttaatctttcattgtcatctcgaaacacacaacccgtgtcccaagatt 466
Query: 601 cgatagtctccgtcagttgcttagggaaatccattccacgatcaacaatccatagcagtt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 cgatagtctccgtcagttgcttagggaaatccattccacgatcaacaatccatagcagtt 406
Query: 661 ccttgcgcagagataggtcagtacagcatattgatgcgcctaacatggcatacgtcccac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ccttgcgcagagataggtcagtacagcatattgatgcgcctaacatggcatacgtcccac 346
Query: 721 ctccacctagtacgtcgtaatagtgcgatgacgccgtctcgatctcatcgatgataagca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 ctccacctagtacgtcgtaatagtgcgatgacgccgtctcgatctcatcgatgataagca 286
Query: 781 tcccattggtagtaagaagacccatattggcaatgactgcttaattccgtttacacctga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 tcccattggtagtaagaagacccatattggcaatgactgcttaattccgtttacacctga 226
Query: 841 aaattatagtgatgggc 857
|||||||||||||||||
Sbjct: 225 aaattatagtgatgggc 209
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5105
Number of Sequences: 1807
Number of extensions: 5105
Number of successful extensions: 27
Number of sequences better than 1.0e-20: 1
length of query: 857
length of database: 10,358,551
effective HSP length: 16
effective length of query: 841
effective length of database: 10,329,639
effective search space: 8687226399
effective search space used: 8687226399
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)